|
EAE |
Autoimmune neuroinflammation |
Mouse |
EAE, 45 dpi (MOG35-55). Ribosome-associated mRNA isolation from lower
thoracic spinal cord of 2-4 month-old mGFAP-Cre:RiboTag mice. |
GSE100330 |
RNA-seq |
Itoh et al. (2018); PMID: 29279367 |
|
SCI |
Traumatic spinal cord injury |
Mouse |
SCI (14 dpi). Ribosome-associated mRNA isolation from lower thoracic spinal
cord lesion epicenter and astrocyte scar 2-4 month-old mGFAP-Cre:RiboTag
mice. |
NCBI GEO:
GSE76097 |
RNA-seq |
Anderson et al. (2016); PMID: 27027288 |
|
LPSsc |
LPS-induced neuroinflammation
(spinal cord) |
Mouse |
24 hour systemic LPS. Ribosome-associated mRNA isolation from lower
thoracic spinal cord of 2-4 month-old mGFAP-Cre:RiboTag mice. |
Present Study |
RNA-seq |
- |
|
LPSBR |
LPS-induced neuroinflammation
(brain) |
Mouse |
24 hour systemic LPS. Total RNA from acutely isolated murine astrocytes from
P30-35 Aldh1l1-eGFP mouse whole brain hemisphere. |
NCBI GEO:
GSE35338 |
Microarray (mouse) |
Zamanian et al (2012); PMID: 22553043 |
|
MCAO1 |
Ischemic-reperfusion injury
(MCAO) - 1 dpi |
Mouse |
MCAO (1 dpi). Total RNA from acutely isolated murine astrocytes from P30-35
Aldh1l1-eGFP mouse whole brain hemisphere. |
NCBI GEO:
GSE35338 |
Microarray (mouse) |
Zamanian et al (2012); PMID: 22553043 |
|
MCAO7 |
Ischemic-reperfusion injury
(MCAO) - 7 dpi |
Mouse |
MCAO (7 dpi). Total RNA from acutely isolated murine astrocytes from P30-35
Aldh1l1-eGFP mouse whole brain hemisphere. |
NCBI GEO:
GSE35338 |
Microarray (mouse) |
Zamanian et al (2012); PMID: 22553043 |
|
EpiH |
Epilepsy |
Human |
59-64 year-old patients vs matched controls. Total RNA from immuno-panned
astrocytes isolated from sclerotic hippocampal specimens involved in epileptic
foci. |
NCBI GEO:
GSE73721 |
RNA-seq |
Zhang et al (2016); PMID: 26687838 |
|
GBMH |
Glioma |
Human |
21-53 year-old patients vs matched controls. Total RNA from immuno-panned
astrocytes isolated from cortical specimens from glioblastoma core and
peripheral regions |
NCBI GEO:
GSE73721 |
RNA-seq |
Zhang et al (2016); PMID: 26687838 |
|
ALSM |
Amyotrophic lateral sclerosis.
(SOD1-G37R model) |
Mouse |
Disease onset (~8 months of age); Ribosome-associated mRNA isolation from
spinal cord of Aldh1l1-Cre:BacTRAP mouse |
NCBI GEO:
GSE74724 |
RNA-seq |
Sun et al (2015); PMID: 26621731 |
|
HDR6/2 |
Huntington’s disease
R6/2 model |
Mouse |
3 month-old HD R6/2 mice. Ribosome-associated mRNA isolation from striatal
astrocytes following viral transduction by AAV2/5 RiboTag construct. |
NCBI GEO:
GSE124846 |
RNA-seq |
Diaz-Castro et al (2019); PMID: 31619545 |
|
HDQ175 |
Huntington’s disease
Q175 model |
Mouse |
12 month-old HD Q175 mice. Ribosome-associated mRNA isolation from
striatal astrocytes following viral transduction by AAV2/5 RiboTag construct. |
NCBI GEO:
GSE124846 |
RNA-seq |
Diaz-Castro et al (2019); PMID: 31619545 |
|
ADAPOE4 |
Alzhiemers disease |
Human |
78-93 year-old patients. APOE staus: 3/3 or 3/4, Braak stage range: IV-VI.
Laser capture microdissection of cells immunoreactive to anti-ALDH1L1
antibody. |
dbGaP:
phs000745.v1.p1 |
RNA-seq |
Sekar et al (2016); PMID 25448601 |
|
ADM |
Alzhiemers disease
(APPswe/PS1dE9 model) |
Mouse |
Chronic disease (15 months old). Total RNA isolated from FACS of Glt1-
positive mouse cortical astrocytes. |
NCBI GEO:
GSE74614 |
RNA-seq |
Kamphuis et al (2015); PMID: PMC5783200 |
|
AgedMC |
Aged motor cortex |
Mouse |
2 year-old (aged). Ribosome-associated mRNA isolation from mGFAPCre:
RiboTag mouse cortex. |
NCBI GEO:
GSE99791 |
RNA-seq |
Boisvert et al (2017); PMID: 29298427 |
|
AgedCB |
Aged cerebellum |
Mouse |
2 year-old (aged). Ribosome-associated mRNA isolation from mGFAPCre:
RiboTag mouse cerebellum. |
NCBI GEO:
GSE99791 |
RNA-seq |
Boisvert et al (2017); PMID: 29298427 |
|
Hthy |
Healthy CNS (spinal cord) |
Mouse |
2-4 months-old. Ribosome-associated mRNA isolation from lower thoracic
spinal cord of healthy, 2-4 month-old mGFAP-Cre:RiboTag mice. |
Present Study |
RNA-seq |
- |